BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D08LP1|AL426360
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1478 1570 0.0
>3x_Contig1478
Length = 9651
Score = 1570 bits (789), Expect = 0.0
Identities = 803/811 (99%)
Strand = Plus / Minus
Query: 1 aaattccaaagatactttaataaggcgccacttttagctgtgcctggtaggacacatcca 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6238 aaattccaaagatactttaataaggcgccacttttagctgtccctggtaggacacatcca 6179
Query: 61 gtggagatctactatacaccagaattccaaagagattatttggatagtgctatwagaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 6178 gtggagatctactatacaccagaattccaaagagattatttggatagtgctataagaact 6119
Query: 121 gttttacagatccatgctacggaggagaagggtgacattttgttattcttaaccggtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6118 gttttacagatccatgctacggaggagaagggtgacattttgttattcttaaccggtgaa 6059
Query: 181 gatgagattgaagatgctgttaggaaaatatcattagaaggggatcagttaattagagag 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6058 gatgagattgaagatgctgtaaggaaaatatcattagaaggggatcagttaattagagag 5999
Query: 241 chaggttgtggtcctatctctgtwtatccattatacggttctttgcctccacatcaacaa 300
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5998 caaggttgtggtcctatctctgtatatccattatacggttctttgcctccacatcaacaa 5939
Query: 301 cagcgcatttttgaacctgctcctgaatcccataatggaagacctggtagaaaagtcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5938 cagcgcatttttgaacctgctcctgaatcccataatggaagacctggtagaaaagtcatt 5879
Query: 361 gtatctactaatattgcagaaacctctttgactattgacggtattgtgtatgttgttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5878 gtatctactaatattgcagaaacctctttgactattgacggtattgtgtatgttgttgat 5819
Query: 421 cctggtttctctaagccaaaagtttacaacccaagaattagagttgaatcccttttggtc 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5818 cctggtttctctaagcaaaaagtttacaacccaagaattagagttgaatcccttttggtc 5759
Query: 481 tctccmatttcmaaggcatcagctcaacaaagagctggtagagctggtcgtaccagacct 540
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5758 tctccaatttcaaaggcatcagctcaacaaagagctggtagagctggtcgtaccagacct 5699
Query: 541 ggtaagtgtttcagactatatactgaagaagctttcaaaaaggaacttatcgagcaatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5698 ggtaagtgtttcagactatatactgaagaagctttcaaaaaggaacttatcgagcaatca 5639
Query: 601 tatcctgaaattctccgtagtaatctttcttcgacagtcttagaactaaagaaactaggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5638 tatcctgaaattctccgtagtaatctttcttcgacagtcttagaactaaagaaactaggc 5579
Query: 661 attgacgatttggtgcatttcgatttcatggaccctcctgccccagaaactatgatgaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5578 attgacgatttggtgcatttcgatttcatggaccctcctgccccagaaactatgatgaga 5519
Query: 721 gccttagaagaattaaactttttggcatgtttagatgacgatggtaatttaacacctttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5518 gccttagaagaattaaactttttggcatgtttagatgacgatggtaatttaacacctttg 5459
Query: 781 ggtagattggcttctcaattccctcttgatc 811
|||||||||||||||||||||||||||||||
Sbjct: 5458 ggtagattggcttctcaattccctcttgatc 5428
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5775
Number of Sequences: 1807
Number of extensions: 5775
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)